BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026A06SP1|AL428478
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1531 1654 0.0
>3x_Contig1531
Length = 8774
Score = 1654 bits (830), Expect = 0.0
Identities = 849/861 (98%)
Strand = Plus / Minus
Query: 1 gatctaagtcctttgaaagttcctatggaggatcaagttcagacgacaaaaaccccgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7375 gatctaagtcctttgaaagttcctatggaggatcaagttcagacgacaaaaaccccgtca 7316
Query: 61 ccaccacgcacaacaatctacccctgtcgcatattccaacccctttgaaagaagacgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7315 ccaccacgcacaacaatctacccctgtcgcatattccaacccctttgaaagaagacgaga 7256
Query: 121 gtttcctagacagtattatatagactaatcagcataatgcacttctttgattcctccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7255 gtttcctagacagtattatatagactaatcagcataatgcacttctttgattcctccaca 7196
Query: 181 atgattaagtaattgtacacaacaatacagtactgacacaacaggaagattgagtccgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7195 atgattaagtaattgtacacaacaatacagtactgacacaacaggaagattgagtccgga 7136
Query: 241 gttaacatcctgcgtcataccgttatggctagtagatattcatgttacaacatataacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7135 gttaacatcctgcgtcataccgttatggctagtagatattcatgttacaacatataacag 7076
Query: 301 tacacaaatcacgtgactaatattataccaaaatgatatcgatatcactttgcacgtgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7075 tacacaaatcacgtgactaatattataccaaaatgatatcgatatcactttgcacgtgct 7016
Query: 361 gaacggtttatwatcatttttgtctcctttctccctcaatttgcaaaatttcttaaaaat 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7015 gaacggtttataatcatttttgtctcctttctccctcaatttgcaaaatttcttaaaaat 6956
Query: 421 ggaacaaataagttactcatttacattactcattacacacatgtctcatgatatgataag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6955 ggaacaaataagttactcatttacattactcattacacacatgtctcatgatatgataag 6896
Query: 481 actgttttgadaactatctacatcttgttagagccaaaagcaatccaacaaagttattga 540
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6895 actgttttgaaaactatctacatcttgttagagccaaaagcaatccaacaaagttattga 6836
Query: 541 daacactgacactgatatctgataaggacagttaawaatwtcaatattttttcattcttc 600
|||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 6835 aaacactgacactgatatctgataaggacagttaaaaatatcaatattttttcattcttc 6776
Query: 601 aaacataagcgagagtttagagattwatattcagcaaaagaatagttgtggaactagtnt 660
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 6775 aaacataagcgagagtttagagattaatattcagcaaaagaatagttgtggaactagtat 6716
Query: 661 cntttttcaaattacaaatwtttgttatcaagtttaatccatatccggccttttgggaat 720
| |||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 6715 cattttacaaattacaaatatatgttatcaagtttaatccatatccggccttttgggaat 6656
Query: 721 ttatagagaaaacgaaaacgagacttcgagaagagaaaatatagttatcattaatcataa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6655 ttatagagaaaacgaaaacgagacttcgagaagagaaaatatagttatcattaatcataa 6596
Query: 781 tccttttttgcatgatgtctaccgatacgatgtatttnaatagctcacgatctatgccga 840
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6595 tccttttttgcatgatgtctaccgatacgatgtattttaatagctcacgatctatgccga 6536
Query: 841 gccatagaggccgtcatcaga 861
|||||||||||||||||||||
Sbjct: 6535 gccatagaggccgtcatcaga 6515
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6207
Number of Sequences: 1807
Number of extensions: 6207
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)